<html><head><meta http-equiv="Content-Type" content="text/html charset=utf-8"></head><body style="word-wrap: break-word; -webkit-nbsp-mode: space; -webkit-line-break: after-white-space;" class="">Hi Guys<div class=""><br class=""></div><div class="">I have officially put the therion brew into the science project</div><div class=""><br class=""></div><div class=""><b class="">brew install homebrew/science/therion</b></div><div class=""><b class=""><br class=""></b></div><div class="">For now therion still needs VTK5. While by default it tries to install VTK6.</div><div class=""><br class=""></div><div class="">best</div><div class="">Chris</div><div class=""><br class=""><div><blockquote type="cite" class=""><div class="">On 31 Jan 2015, at 14:08, Yones Shariatmadari <<a href="mailto:yonessh2@gmail.com" class="">yonessh2@gmail.com</a>> wrote:</div><br class="Apple-interchange-newline"><div class=""><div dir="ltr" class="">Hi Friends<div class="">thank you for your interest my friends.<div class="">but i have an error in installing therion.</div><div class=""><br class=""></div><div class="">i use mac os 10.10.1 !</div><div class=""><br class=""></div><div class="">type the following brew in terminal :</div><div class=""><br class=""></div><div class=""><br class=""></div><div class="">the result is :</div><div class=""><br class=""></div><div class=""><div style="margin: 0px; font-size: 11px; font-family: Menlo;" class="">Macs-MacBook-Pro:~ yonesshariatmadari$ brew install <a href="https://raw.githubusercontent.com/ladislavb/homebrew-science/master/therion.rb" class="">https://raw.githubusercontent.com/ladislavb/homebrew-science/master/therion.rb</a> </div><div style="margin: 0px; font-size: 11px; font-family: Menlo;" class="">######################################################################## 100.0%</div><div style="margin: 0px; font-size: 11px; font-family: Menlo;" class=""><span style="text-decoration:underline;color:rgb(195,55,32)" class="">Warning</span>: You have an outdated version of /usr/bin/install_name_tool installed.</div><div style="margin: 0px; font-size: 11px; font-family: Menlo;" class="">This will cause binary package installations to fail.</div><div style="margin: 0px; font-size: 11px; font-family: Menlo;" class="">This can happen if you install osx-gcc-installer or RailsInstaller.</div><div style="margin: 0px; font-size: 11px; font-family: Menlo;" class="">To restore it, you must reinstall OS X or restore the binary from</div><div style="margin: 0px; font-size: 11px; font-family: Menlo;" class="">the OS packages.</div><div style="margin: 0px; font-size: 11px; font-family: Menlo; color: rgb(52, 189, 38);" class=""><b class="">==></b><span style="" class=""><b class=""> Installing dependencies for therion: </b></span><b class="">libpng, freetype, libtool, jpeg, xz, imagemagick, lcdf-typetools, boost, fontconfig, szip, hdf5, libtiff, vtk, wxmac</b></div><div style="margin: 0px; font-size: 11px; font-family: Menlo;" class=""><span style="color:rgb(52,189,38)" class=""><b class="">==></b></span><b class=""> Installing therion dependency: </b><span style="color:rgb(52,189,38)" class=""><b class="">libpng</b></span></div><div style="margin: 0px; font-size: 11px; font-family: Menlo;" class=""><span style="color:rgb(83,48,225)" class=""><b class="">==></b></span><b class=""> Downloading <a href="https://downloads.sf.net/project/machomebrew/Bottles/libpng-1.6.16.yosemite.bottle.tar.gz" class="">https://downloads.sf.net/project/machomebrew/Bottles/libpng-1.6.16.yosemite.bottle.tar.gz</a></b></div><div style="margin: 0px; font-size: 11px; font-family: Menlo;" class="">######################################################################## 100.0%</div><div style="margin: 0px; font-size: 11px; font-family: Menlo;" class=""><span style="color:rgb(83,48,225)" class=""><b class="">==></b></span><b class=""> Pouring libpng-1.6.16.yosemite.bottle.tar.gz</b></div><div style="margin: 0px; font-size: 11px; font-family: Menlo;" class="">/usr/bin/install_name_tool: object: /usr/local/Cellar/libpng/1.6.16/bin/pngfix malformed object (unknown load command 9)</div><div style="margin: 0px; font-size: 11px; font-family: Menlo;" class=""><span style="text-decoration:underline;color:rgb(195,55,32)" class="">Error</span>: Failed to fix install names</div><div style="margin: 0px; font-size: 11px; font-family: Menlo;" class="">The formula built, but you may encounter issues using it or linking other</div><div style="margin: 0px; font-size: 11px; font-family: Menlo;" class="">formula against it.</div><div style="margin: 0px; font-size: 11px; font-family: Menlo;" class=""><span style="color:rgb(83,48,225)" class=""><b class="">==></b></span><b class=""> Summary</b></div><div style="margin: 0px; font-size: 11px; font-family: Menlo;" class="">๐บ /usr/local/Cellar/libpng/1.6.16: 17 files, 1.3M</div><div style="margin: 0px; font-size: 11px; font-family: Menlo;" class=""><span style="color:rgb(52,189,38)" class=""><b class="">==></b></span><b class=""> Installing therion dependency: </b><span style="color:rgb(52,189,38)" class=""><b class="">freetype</b></span></div><div style="margin: 0px; font-size: 11px; font-family: Menlo;" class=""><span style="color:rgb(83,48,225)" class=""><b class="">==></b></span><b class=""> Downloading <a href="https://downloads.sf.net/project/machomebrew/Bottles/freetype-2.5.5.yosemite.bottle.tar.gz" class="">https://downloads.sf.net/project/machomebrew/Bottles/freetype-2.5.5.yosemite.bottle.tar.gz</a></b></div><div style="margin: 0px; font-size: 11px; font-family: Menlo;" class="">######################################################################## 100.0%</div><div style="margin: 0px; font-size: 11px; font-family: Menlo;" class=""><span style="color:rgb(83,48,225)" class=""><b class="">==></b></span><b class=""> Pouring freetype-2.5.5.yosemite.bottle.tar.gz</b></div><div style="margin: 0px; font-size: 11px; font-family: Menlo;" class="">/usr/bin/install_name_tool: object: /usr/local/Cellar/freetype/2.5.5/lib/libfreetype.6.dylib malformed object (unknown load command 8)</div><div style="margin: 0px; font-size: 11px; font-family: Menlo;" class=""><span style="text-decoration:underline;color:rgb(195,55,32)" class="">Error</span>: Failed to fix install names</div><div style="margin: 0px; font-size: 11px; font-family: Menlo;" class="">The formula built, but you may encounter issues using it or linking other</div><div style="margin: 0px; font-size: 11px; font-family: Menlo;" class="">formula against it.</div><div style="margin: 0px; font-size: 11px; font-family: Menlo;" class=""><span style="color:rgb(83,48,225)" class=""><b class="">==></b></span><b class=""> Summary</b></div><div style="margin: 0px; font-size: 11px; font-family: Menlo;" class="">๐บ /usr/local/Cellar/freetype/2.5.5: 60 files, 2.6M</div><div style="margin: 0px; font-size: 11px; font-family: Menlo;" class=""><span style="color:rgb(52,189,38)" class=""><b class="">==></b></span><b class=""> Installing therion dependency: </b><span style="color:rgb(52,189,38)" class=""><b class="">libtool</b></span></div><div style="margin: 0px; font-size: 11px; font-family: Menlo;" class=""><span style="color:rgb(83,48,225)" class=""><b class="">==></b></span><b class=""> Downloading <a href="https://downloads.sf.net/project/machomebrew/Bottles/libtool-2.4.5.yosemite.bottle.tar.gz" class="">https://downloads.sf.net/project/machomebrew/Bottles/libtool-2.4.5.yosemite.bottle.tar.gz</a></b></div><div style="margin: 0px; font-size: 11px; font-family: Menlo;" class="">######################################################################## 100.0%</div><div style="margin: 0px; font-size: 11px; font-family: Menlo;" class=""><span style="color:rgb(83,48,225)" class=""><b class="">==></b></span><b class=""> Pouring libtool-2.4.5.yosemite.bottle.tar.gz</b></div><div style="margin: 0px; font-size: 11px; font-family: Menlo;" class=""><span style="color:rgb(83,48,225)" class=""><b class="">==></b></span><b class=""> Caveats</b></div><div style="margin: 0px; font-size: 11px; font-family: Menlo;" class="">In order to prevent conflicts with Apple's own libtool we have prepended a "g"</div><div style="margin: 0px; font-size: 11px; font-family: Menlo;" class="">so, you have instead: glibtool and glibtoolize.</div><div style="margin: 0px; font-size: 11px; font-family: Menlo;" class="">/usr/bin/install_name_tool: object: /usr/local/Cellar/libtool/2.4.5/lib/libltdl.7.dylib malformed object (unknown load command 8)</div><div style="margin: 0px; font-size: 11px; font-family: Menlo;" class=""><span style="text-decoration:underline;color:rgb(195,55,32)" class="">Error</span>: Failed to fix install names</div><div style="margin: 0px; font-size: 11px; font-family: Menlo;" class="">The formula built, but you may encounter issues using it or linking other</div><div style="margin: 0px; font-size: 11px; font-family: Menlo;" class="">formula against it.</div><div style="margin: 0px; font-size: 11px; font-family: Menlo;" class=""><span style="color:rgb(83,48,225)" class=""><b class="">==></b></span><b class=""> Summary</b></div><div style="margin: 0px; font-size: 11px; font-family: Menlo;" class="">๐บ /usr/local/Cellar/libtool/2.4.5: 69 files, 3.8M</div><div style="margin: 0px; font-size: 11px; font-family: Menlo;" class=""><span style="color:rgb(52,189,38)" class=""><b class="">==></b></span><b class=""> Installing therion dependency: </b><span style="color:rgb(52,189,38)" class=""><b class="">jpeg</b></span></div><div style="margin: 0px; font-size: 11px; font-family: Menlo;" class=""><span style="color:rgb(83,48,225)" class=""><b class="">==></b></span><b class=""> Downloading <a href="https://downloads.sf.net/project/machomebrew/Bottles/jpeg-8d.yosemite.bottle.2.tar.gz" class="">https://downloads.sf.net/project/machomebrew/Bottles/jpeg-8d.yosemite.bottle.2.tar.gz</a></b></div><div style="margin: 0px; font-size: 11px; font-family: Menlo;" class="">######################################################################## 100.0%</div><div style="margin: 0px; font-size: 11px; font-family: Menlo;" class=""><span style="color:rgb(83,48,225)" class=""><b class="">==></b></span><b class=""> Pouring jpeg-8d.yosemite.bottle.2.tar.gz</b></div><div style="margin: 0px; font-size: 11px; font-family: Menlo;" class="">/usr/bin/install_name_tool: object: /usr/local/Cellar/jpeg/8d/bin/cjpeg malformed object (unknown load command 9)</div><div style="margin: 0px; font-size: 11px; font-family: Menlo;" class=""><span style="text-decoration:underline;color:rgb(195,55,32)" class="">Error</span>: Failed to fix install names</div><div style="margin: 0px; font-size: 11px; font-family: Menlo;" class="">The formula built, but you may encounter issues using it or linking other</div><div style="margin: 0px; font-size: 11px; font-family: Menlo;" class="">formula against it.</div><div style="margin: 0px; font-size: 11px; font-family: Menlo;" class=""><span style="color:rgb(83,48,225)" class=""><b class="">==></b></span><b class=""> Summary</b></div><div style="margin: 0px; font-size: 11px; font-family: Menlo;" class="">๐บ /usr/local/Cellar/jpeg/8d: 18 files, 776K</div><div style="margin: 0px; font-size: 11px; font-family: Menlo;" class=""><span style="color:rgb(52,189,38)" class=""><b class="">==></b></span><b class=""> Installing therion dependency: </b><span style="color:rgb(52,189,38)" class=""><b class="">xz</b></span></div><div style="margin: 0px; font-size: 11px; font-family: Menlo;" class=""><span style="color:rgb(83,48,225)" class=""><b class="">==></b></span><b class=""> Downloading <a href="https://downloads.sf.net/project/machomebrew/Bottles/xz-5.2.0.yosemite.bottle.tar.gz" class="">https://downloads.sf.net/project/machomebrew/Bottles/xz-5.2.0.yosemite.bottle.tar.gz</a></b></div><div style="margin: 0px; font-size: 11px; font-family: Menlo;" class="">######################################################################## 100.0%</div><div style="margin: 0px; font-size: 11px; font-family: Menlo;" class=""><span style="color:rgb(83,48,225)" class=""><b class="">==></b></span><b class=""> Pouring xz-5.2.0.yosemite.bottle.tar.gz</b></div><div style="margin: 0px; font-size: 11px; font-family: Menlo;" class="">/usr/bin/install_name_tool: object: /usr/local/Cellar/xz/5.2.0/bin/lzmadec malformed object (unknown load command 9)</div><div style="margin: 0px; font-size: 11px; font-family: Menlo;" class=""><span style="text-decoration:underline;color:rgb(195,55,32)" class="">Error</span>: Failed to fix install names</div><div style="margin: 0px; font-size: 11px; font-family: Menlo;" class="">The formula built, but you may encounter issues using it or linking other</div><div style="margin: 0px; font-size: 11px; font-family: Menlo;" class="">formula against it.</div><div style="margin: 0px; font-size: 11px; font-family: Menlo;" class=""><span style="color:rgb(83,48,225)" class=""><b class="">==></b></span><b class=""> Summary</b></div><div style="margin: 0px; font-size: 11px; font-family: Menlo;" class="">๐บ /usr/local/Cellar/xz/5.2.0: 59 files, 1.7M</div><div style="margin: 0px; font-size: 11px; font-family: Menlo;" class=""><span style="color:rgb(52,189,38)" class=""><b class="">==></b></span><b class=""> Installing therion dependency: </b><span style="color:rgb(52,189,38)" class=""><b class="">imagemagick</b></span></div><div style="margin: 0px; font-size: 11px; font-family: Menlo;" class=""><span style="color:rgb(83,48,225)" class=""><b class="">==></b></span><b class=""> Downloading <a href="https://downloads.sf.net/project/machomebrew/Bottles/imagemagick-6.9.0-3.yosemite.bottle.tar.gz" class="">https://downloads.sf.net/project/machomebrew/Bottles/imagemagick-6.9.0-3.yosemite.bottle.tar.gz</a></b></div><div style="margin: 0px; font-size: 11px; font-family: Menlo;" class="">######################################################################## 100.0%</div><div style="margin: 0px; font-size: 11px; font-family: Menlo;" class=""><span style="color:rgb(83,48,225)" class=""><b class="">==></b></span><b class=""> Pouring imagemagick-6.9.0-3.yosemite.bottle.tar.gz</b></div><div style="margin: 0px; font-size: 11px; font-family: Menlo;" class="">/usr/bin/install_name_tool: object: /usr/local/Cellar/imagemagick/6.9.0-3/bin/animate malformed object (unknown load command 9)</div><div style="margin: 0px; font-size: 11px; font-family: Menlo;" class=""><span style="text-decoration:underline;color:rgb(195,55,32)" class="">Error</span>: Failed to fix install names</div><div style="margin: 0px; font-size: 11px; font-family: Menlo;" class="">The formula built, but you may encounter issues using it or linking other</div><div style="margin: 0px; font-size: 11px; font-family: Menlo;" class="">formula against it.</div><div style="margin: 0px; font-size: 11px; font-family: Menlo;" class=""><span style="color:rgb(83,48,225)" class=""><b class="">==></b></span><b class=""> Summary</b></div><div style="margin: 0px; font-size: 11px; font-family: Menlo;" class="">๐บ /usr/local/Cellar/imagemagick/6.9.0-3: 1440 files, 22M</div><div style="margin: 0px; font-size: 11px; font-family: Menlo;" class=""><span style="color:rgb(52,189,38)" class=""><b class="">==></b></span><b class=""> Installing therion dependency: </b><span style="color:rgb(52,189,38)" class=""><b class="">lcdf-typetools</b></span></div><div style="margin: 0px; font-size: 11px; font-family: Menlo;" class="">couldn't understand kern.osversion `14.0.0'</div><div style="margin: 0px; font-size: 11px; font-family: Menlo;" class=""><span style="color:rgb(83,48,225)" class=""><b class="">==></b></span><b class=""> Downloading <a href="http://www.lcdf.org/type/lcdf-typetools-2.104.tar.gz" class="">http://www.lcdf.org/type/lcdf-typetools-2.104.tar.gz</a></b></div><div style="margin: 0px; font-size: 11px; font-family: Menlo;" class="">######################################################################## 100.0%</div><div style="margin: 0px; font-size: 11px; font-family: Menlo;" class=""><span style="color:rgb(83,48,225)" class=""><b class="">==></b></span><b class=""> ./configure --prefix=/usr/local/Cellar/lcdf-typetools/2.104 --without-kpathsea</b></div><div style="margin: 0px; font-size: 11px; font-family: Menlo;" class=""><span style="color:rgb(83,48,225)" class=""><b class="">==></b></span><b class=""> make install</b></div><div style="margin: 0px; font-size: 11px; font-family: Menlo;" class="">๐บ /usr/local/Cellar/lcdf-typetools/2.104: 29 files, 4.3M, built in 5.5 minutes</div><div style="margin: 0px; font-size: 11px; font-family: Menlo;" class=""><span style="color:rgb(52,189,38)" class=""><b class="">==></b></span><b class=""> Installing therion dependency: </b><span style="color:rgb(52,189,38)" class=""><b class="">boost</b></span></div><div style="margin: 0px; font-size: 11px; font-family: Menlo;" class=""><span style="color:rgb(83,48,225)" class=""><b class="">==></b></span><b class=""> Downloading <a href="https://downloads.sf.net/project/machomebrew/Bottles/boost-1.57.0.yosemite.bottle.tar.gz" class="">https://downloads.sf.net/project/machomebrew/Bottles/boost-1.57.0.yosemite.bottle.tar.gz</a></b></div><div style="margin: 0px; font-size: 11px; font-family: Menlo;" class="">######################################################################## 100.0%</div><div style="margin: 0px; font-size: 11px; font-family: Menlo;" class=""><span style="color:rgb(83,48,225)" class=""><b class="">==></b></span><b class=""> Pouring boost-1.57.0.yosemite.bottle.tar.gz</b></div><div style="margin: 0px; font-size: 11px; font-family: Menlo;" class="">/usr/bin/install_name_tool: object: /usr/local/Cellar/boost/1.57.0/lib/libboost_atomic-mt.dylib malformed object (unknown load command 8)</div><div style="margin: 0px; font-size: 11px; font-family: Menlo;" class=""><span style="text-decoration:underline;color:rgb(195,55,32)" class="">Error</span>: Failed to fix install names</div><div style="margin: 0px; font-size: 11px; font-family: Menlo;" class="">The formula built, but you may encounter issues using it or linking other</div><div style="margin: 0px; font-size: 11px; font-family: Menlo;" class="">formula against it.</div><div style="margin: 0px; font-size: 11px; font-family: Menlo;" class=""><span style="color:rgb(83,48,225)" class=""><b class="">==></b></span><b class=""> Summary</b></div><div style="margin: 0px; font-size: 11px; font-family: Menlo;" class="">๐บ /usr/local/Cellar/boost/1.57.0: 10572 files, 439M</div><div style="margin: 0px; font-size: 11px; font-family: Menlo;" class=""><span style="color:rgb(52,189,38)" class=""><b class="">==></b></span><b class=""> Installing therion dependency: </b><span style="color:rgb(52,189,38)" class=""><b class="">fontconfig</b></span></div><div style="margin: 0px; font-size: 11px; font-family: Menlo;" class=""><span style="color:rgb(83,48,225)" class=""><b class="">==></b></span><b class=""> Downloading <a href="https://downloads.sf.net/project/machomebrew/Bottles/fontconfig-2.11.1.yosemite.bottle.3.tar.gz" class="">https://downloads.sf.net/project/machomebrew/Bottles/fontconfig-2.11.1.yosemite.bottle.3.tar.gz</a></b></div><div style="margin: 0px; font-size: 11px; font-family: Menlo;" class="">######################################################################## 100.0%</div><div style="margin: 0px; font-size: 11px; font-family: Menlo;" class=""><span style="color:rgb(83,48,225)" class=""><b class="">==></b></span><b class=""> Pouring fontconfig-2.11.1.yosemite.bottle.3.tar.gz</b></div><div style="margin: 0px; font-size: 11px; font-family: Menlo;" class="">/usr/bin/install_name_tool: object: /usr/local/Cellar/fontconfig/2.11.1/bin/fc-cache malformed object (unknown load command 9)</div><div style="margin: 0px; font-size: 11px; font-family: Menlo;" class=""><span style="text-decoration:underline;color:rgb(195,55,32)" class="">Error</span>: Failed to fix install names</div><div style="margin: 0px; font-size: 11px; font-family: Menlo;" class="">The formula built, but you may encounter issues using it or linking other</div><div style="margin: 0px; font-size: 11px; font-family: Menlo;" class="">formula against it.</div><div style="margin: 0px; font-size: 11px; font-family: Menlo;" class=""><span style="color:rgb(83,48,225)" class=""><b class="">==></b></span><b class=""> /usr/local/Cellar/fontconfig/2.11.1/bin/fc-cache -frv</b></div><div style="margin: 0px; font-size: 11px; font-family: Menlo; min-height: 13px;" class=""><br class=""></div><div style="margin: 0px; font-size: 11px; font-family: Menlo;" class=""><br class=""></div><div style="margin: 0px; font-size: 11px; font-family: Menlo;" class=""><br class=""></div><div style="margin: 0px; font-size: 11px; font-family: Menlo;" class=""><br class=""></div><div style="margin: 0px; font-size: 11px; font-family: Menlo;" class="">^\<span style="text-decoration:underline;color:rgb(195,55,32)" class="">Warning</span>: The post-install step did not complete successfully</div><div style="margin: 0px; font-size: 11px; font-family: Menlo;" class="">You can try again using `brew postinstall fontconfig`</div><div style="margin: 0px; font-size: 11px; font-family: Menlo;" class=""><span style="color:rgb(83,48,225)" class=""><b class="">==></b></span><b class=""> Summary</b></div><div style="margin: 0px; font-size: 11px; font-family: Menlo;" class="">๐บ /usr/local/Cellar/fontconfig/2.11.1: 448 files, 3.6M</div><div style="margin: 0px; font-size: 11px; font-family: Menlo;" class=""><span style="color:rgb(52,189,38)" class=""><b class="">==></b></span><b class=""> Installing therion dependency: </b><span style="color:rgb(52,189,38)" class=""><b class="">szip</b></span></div><div style="margin: 0px; font-size: 11px; font-family: Menlo;" class="">couldn't understand kern.osversion `14.0.0'</div><div style="margin: 0px; font-size: 11px; font-family: Menlo;" class=""><span style="color:rgb(83,48,225)" class=""><b class="">==></b></span><b class=""> Downloading <a href="http://www.hdfgroup.org/ftp/lib-external/szip/2.1/src/szip-2.1.tar.gz" class="">http://www.hdfgroup.org/ftp/lib-external/szip/2.1/src/szip-2.1.tar.gz</a></b></div><div style="margin: 0px; font-size: 11px; font-family: Menlo;" class="">######################################################################## 100.0%</div><div style="margin: 0px; font-size: 11px; font-family: Menlo;" class=""><span style="color:rgb(83,48,225)" class=""><b class="">==></b></span><b class=""> ./configure --prefix=/usr/local/Cellar/szip/2.1</b></div><div style="margin: 0px; font-size: 11px; font-family: Menlo;" class=""><span style="color:rgb(83,48,225)" class=""><b class="">==></b></span><b class=""> make install</b></div><div style="margin: 0px; font-size: 11px; font-family: Menlo;" class="">๐บ /usr/local/Cellar/szip/2.1: 9 files, 132K, built in 28 seconds</div><div style="margin: 0px; font-size: 11px; font-family: Menlo;" class=""><span style="color:rgb(52,189,38)" class=""><b class="">==></b></span><b class=""> Installing therion dependency: </b><span style="color:rgb(52,189,38)" class=""><b class="">hdf5</b></span></div><div style="margin: 0px; font-size: 11px; font-family: Menlo;" class=""><span style="color:rgb(83,48,225)" class=""><b class="">==></b></span><b class=""> Downloading <a href="https://downloads.sf.net/project/machomebrew/Bottles/science/hdf5-1.8.14.yosemite.bottle.tar.gz" class="">https://downloads.sf.net/project/machomebrew/Bottles/science/hdf5-1.8.14.yosemite.bottle.tar.gz</a></b></div><div style="margin: 0px; font-size: 11px; font-family: Menlo;" class="">######################################################################## 100.0%</div><div style="margin: 0px; font-size: 11px; font-family: Menlo;" class=""><span style="color:rgb(83,48,225)" class=""><b class="">==></b></span><b class=""> Pouring hdf5-1.8.14.yosemite.bottle.tar.gz</b></div><div style="margin: 0px; font-size: 11px; font-family: Menlo;" class="">/usr/bin/install_name_tool: object: /usr/local/Cellar/hdf5/1.8.14/bin/gif2h5 malformed object (unknown load command 9)</div><div style="margin: 0px; font-size: 11px; font-family: Menlo;" class=""><span style="text-decoration:underline;color:rgb(195,55,32)" class="">Error</span>: Failed to fix install names</div><div style="margin: 0px; font-size: 11px; font-family: Menlo;" class="">The formula built, but you may encounter issues using it or linking other</div><div style="margin: 0px; font-size: 11px; font-family: Menlo;" class="">formula against it.</div><div style="margin: 0px; font-size: 11px; font-family: Menlo;" class=""><span style="color:rgb(83,48,225)" class=""><b class="">==></b></span><b class=""> Summary</b></div><div style="margin: 0px; font-size: 11px; font-family: Menlo;" class="">๐บ /usr/local/Cellar/hdf5/1.8.14: 118 files, 9.9M</div><div style="margin: 0px; font-size: 11px; font-family: Menlo;" class=""><span style="color:rgb(52,189,38)" class=""><b class="">==></b></span><b class=""> Installing therion dependency: </b><span style="color:rgb(52,189,38)" class=""><b class="">libtiff</b></span></div><div style="margin: 0px; font-size: 11px; font-family: Menlo;" class=""><span style="color:rgb(83,48,225)" class=""><b class="">==></b></span><b class=""> Downloading <a href="https://downloads.sf.net/project/machomebrew/Bottles/libtiff-4.0.3.yosemite.bottle.tar.gz" class="">https://downloads.sf.net/project/machomebrew/Bottles/libtiff-4.0.3.yosemite.bottle.tar.gz</a></b></div><div style="margin: 0px; font-size: 11px; font-family: Menlo;" class="">######################################################################## 100.0%</div><div style="margin: 0px; font-size: 11px; font-family: Menlo;" class=""><span style="color:rgb(83,48,225)" class=""><b class="">==></b></span><b class=""> Pouring libtiff-4.0.3.yosemite.bottle.tar.gz</b></div><div style="margin: 0px; font-size: 11px; font-family: Menlo;" class="">/usr/bin/install_name_tool: object: /usr/local/Cellar/libtiff/4.0.3/bin/bmp2tiff malformed object (unknown load command 9)</div><div style="margin: 0px; font-size: 11px; font-family: Menlo;" class=""><span style="text-decoration:underline;color:rgb(195,55,32)" class="">Error</span>: Failed to fix install names</div><div style="margin: 0px; font-size: 11px; font-family: Menlo;" class="">The formula built, but you may encounter issues using it or linking other</div><div style="margin: 0px; font-size: 11px; font-family: Menlo;" class="">formula against it.</div><div style="margin: 0px; font-size: 11px; font-family: Menlo;" class=""><span style="color:rgb(83,48,225)" class=""><b class="">==></b></span><b class=""> Summary</b></div><div style="margin: 0px; font-size: 11px; font-family: Menlo;" class="">๐บ /usr/local/Cellar/libtiff/4.0.3: 254 files, 3.8M</div><div style="margin: 0px; font-size: 11px; font-family: Menlo;" class=""><span style="color:rgb(52,189,38)" class=""><b class="">==></b></span><b class=""> Installing therion dependency: </b><span style="color:rgb(52,189,38)" class=""><b class="">vtk</b></span></div><div style="margin: 0px; font-size: 11px; font-family: Menlo;" class=""><span style="color:rgb(83,48,225)" class=""><b class="">==></b></span><b class=""> Downloading <a href="https://downloads.sf.net/project/machomebrew/Bottles/science/vtk-6.1.0_1.yosemite.bottle.tar.gz" class="">https://downloads.sf.net/project/machomebrew/Bottles/science/vtk-6.1.0_1.yosemite.bottle.tar.gz</a></b></div><div style="margin: 0px; font-size: 11px; font-family: Menlo;" class="">######################################################################## 100.0%</div><div style="margin: 0px; font-size: 11px; font-family: Menlo;" class=""><span style="color:rgb(83,48,225)" class=""><b class="">==></b></span><b class=""> Pouring vtk-6.1.0_1.yosemite.bottle.tar.gz</b></div><div style="margin: 0px; font-size: 11px; font-family: Menlo;" class=""><span style="color:rgb(83,48,225)" class=""><b class="">==></b></span><b class=""> Caveats</b></div><div style="margin: 0px; font-size: 11px; font-family: Menlo;" class="">Even without the --with-qt option, you can display native VTK render windows</div><div style="margin: 0px; font-size: 11px; font-family: Menlo;" class="">from python. Alternatively, you can integrate the RenderWindowInteractor</div><div style="margin: 0px; font-size: 11px; font-family: Menlo;" class="">in PyQt, PySide, Tk or Wx at runtime. Read more:</div><div style="margin: 0px; font-size: 11px; font-family: Menlo;" class=""> import vtk.qt4; help(vtk.qt4) or import vtk.wx; help(vtk.wx)</div><div style="margin: 0px; font-size: 11px; font-family: Menlo; min-height: 13px;" class=""><br class=""></div><div style="margin: 0px; font-size: 11px; font-family: Menlo; min-height: 13px;" class=""><br class=""></div><div style="margin: 0px; font-size: 11px; font-family: Menlo;" class="">Python modules have been installed and Homebrew's site-packages is not</div><div style="margin: 0px; font-size: 11px; font-family: Menlo;" class="">in your Python sys.path, so you will not be able to import the modules</div><div style="margin: 0px; font-size: 11px; font-family: Menlo;" class="">this formula installed. If you plan to develop with these modules,</div><div style="margin: 0px; font-size: 11px; font-family: Menlo;" class="">please run:</div><div style="margin: 0px; font-size: 11px; font-family: Menlo;" class=""> mkdir -p /Users/yonesshariatmadari/Library/Python/2.7/lib/python/site-packages</div><div style="margin: 0px; font-size: 11px; font-family: Menlo;" class=""> echo 'import site; site.addsitedir("/usr/local/lib/python2.7/site-packages")' >> /Users/yonesshariatmadari/Library/Python/2.7/lib/python/site-packages/homebrew.pth</div><div style="margin: 0px; font-size: 11px; font-family: Menlo;" class="">/usr/bin/install_name_tool: object: /usr/local/Cellar/vtk/6.1.0_1/bin/vtkHashSource-6.1 malformed object (unknown load command 9)</div><div style="margin: 0px; font-size: 11px; font-family: Menlo;" class=""><span style="text-decoration:underline;color:rgb(195,55,32)" class="">Error</span>: Failed to fix install names</div><div style="margin: 0px; font-size: 11px; font-family: Menlo;" class="">The formula built, but you may encounter issues using it or linking other</div><div style="margin: 0px; font-size: 11px; font-family: Menlo;" class="">formula against it.</div><div style="margin: 0px; font-size: 11px; font-family: Menlo;" class=""><span style="color:rgb(83,48,225)" class=""><b class="">==></b></span><b class=""> Summary</b></div><div style="margin: 0px; font-size: 11px; font-family: Menlo;" class="">๐บ /usr/local/Cellar/vtk/6.1.0_1: 3005 files, 123M</div><div style="margin: 0px; font-size: 11px; font-family: Menlo;" class=""><span style="color:rgb(52,189,38)" class=""><b class="">==></b></span><b class=""> Installing therion dependency: </b><span style="color:rgb(52,189,38)" class=""><b class="">wxmac</b></span></div><div style="margin: 0px; font-size: 11px; font-family: Menlo;" class=""><span style="color:rgb(83,48,225)" class=""><b class="">==></b></span><b class=""> Downloading <a href="https://downloads.sf.net/project/machomebrew/Bottles/wxmac-3.0.2.yosemite.bottle.9.tar.gz" class="">https://downloads.sf.net/project/machomebrew/Bottles/wxmac-3.0.2.yosemite.bottle.9.tar.gz</a></b></div><div style="margin: 0px; font-size: 11px; font-family: Menlo;" class="">######################################################################## 100.0%</div><div style="margin: 0px; font-size: 11px; font-family: Menlo;" class=""><span style="color:rgb(83,48,225)" class=""><b class="">==></b></span><b class=""> Pouring wxmac-3.0.2.yosemite.bottle.9.tar.gz</b></div><div style="margin: 0px; font-size: 11px; font-family: Menlo;" class="">/usr/bin/install_name_tool: for architecture i386 object: /usr/local/Cellar/wxmac/3.0.2/bin/wxrc-3.0 malformed object (unknown load command 9)</div><div style="margin: 0px; font-size: 11px; font-family: Menlo;" class=""><span style="text-decoration:underline;color:rgb(195,55,32)" class="">Error</span>: Failed to fix install names</div><div style="margin: 0px; font-size: 11px; font-family: Menlo;" class="">The formula built, but you may encounter issues using it or linking other</div><div style="margin: 0px; font-size: 11px; font-family: Menlo;" class="">formula against it.</div><div style="margin: 0px; font-size: 11px; font-family: Menlo;" class=""><span style="color:rgb(83,48,225)" class=""><b class="">==></b></span><b class=""> Summary</b></div><div style="margin: 0px; font-size: 11px; font-family: Menlo;" class="">๐บ /usr/local/Cellar/wxmac/3.0.2: 777 files, 41M</div><div style="margin: 0px; font-size: 11px; font-family: Menlo;" class=""><span style="color:rgb(52,189,38)" class=""><b class="">==></b></span><b class=""> Installing </b><span style="color:rgb(52,189,38)" class=""><b class="">therion</b></span></div><div style="margin: 0px; font-size: 11px; font-family: Menlo;" class="">couldn't understand kern.osversion `14.0.0'</div><div style="margin: 0px; font-size: 11px; font-family: Menlo;" class=""><span style="color:rgb(83,48,225)" class=""><b class="">==></b></span><b class=""> Downloading <a href="http://therion.speleo.sk/downloads/therion-5.3.15.tar.gz" class="">http://therion.speleo.sk/downloads/therion-5.3.15.tar.gz</a></b></div><div style="margin: 0px; font-size: 11px; font-family: Menlo;" class="">######################################################################## 100.0%</div><div style="margin: 0px; font-size: 11px; font-family: Menlo;" class=""><span style="color:rgb(83,48,225)" class=""><b class="">==></b></span><b class=""> Downloading <a href="http://www.lblazek.cz/osx_vtk6.patch" class="">http://www.lblazek.cz/osx_vtk6.patch</a></b></div><div style="margin: 0px; font-size: 11px; font-family: Menlo;" class="">######################################################################## 100.0%</div><div style="margin: 0px; font-size: 11px; font-family: Menlo;" class=""><span style="color:rgb(83,48,225)" class=""><b class="">==></b></span><b class=""> Patching</b></div><div style="margin: 0px; font-size: 11px; font-family: Menlo;" class="">patching file loch/lxData.cxx</div><div style="margin: 0px; font-size: 11px; font-family: Menlo;" class="">Hunk #1 succeeded at 540 (offset 5 lines).</div><div style="margin: 0px; font-size: 11px; font-family: Menlo;" class="">Hunk #2 succeeded at 582 (offset 5 lines).</div><div style="margin: 0px; font-size: 11px; font-family: Menlo;" class="">patching file loch/Makefile</div><div style="margin: 0px; font-size: 11px; font-family: Menlo;" class=""><span style="color:rgb(83,48,225)" class=""><b class="">==></b></span><b class=""> make config-macosx</b></div><div style="margin: 0px; font-size: 11px; font-family: Menlo;" class=""><span style="color:rgb(83,48,225)" class=""><b class="">==></b></span><b class=""> make</b></div><div style="margin: 0px; font-size: 11px; font-family: Menlo;" class="">couldn't understand kern.osversion `14.0.0'</div><div style="margin: 0px; font-size: 11px; font-family: Menlo;" class="">loch/lxFile.cxx: In member function โvoid lxFile::ImportPLT(const char*)โ:</div><div style="margin: 0px; font-size: 11px; font-family: Menlo;" class="">loch/lxFile.cxx:755: error: โgetlineโ was not declared in this scope</div><div style="margin: 0px; font-size: 11px; font-family: Menlo;" class="">make: *** [extern/lxFile.o] Error 1</div><div style="margin: 0px; font-size: 11px; font-family: Menlo;" class="">make: *** Waiting for unfinished jobs....</div><div style="margin: 0px; font-size: 11px; font-family: Menlo;" class="">couldn't understand kern.osversion `14.0.0'</div><div style="margin: 0px; font-size: 11px; font-family: Menlo; min-height: 13px;" class=""><br class=""></div><div style="margin: 0px; font-size: 11px; font-family: Menlo;" class=""><span style="text-decoration:underline;color:rgb(195,55,32)" class="">READ THIS</span>: <span style="text-decoration:underline" class=""><a href="http://git.io/brew-troubleshooting" class="">http://git.io/brew-troubleshooting</a></span></div></div><div class=""><span style="text-decoration:underline" class=""><br class=""></span></div><div class=""><span style="text-decoration:underline" class=""><br class=""></span></div><div class=""><span style="text-decoration:underline" class=""><br class=""></span></div><div class=""><u class="">what should i do for this error, please help me.</u></div><div class=""><u class=""><br class=""></u></div><div class=""><u class="">thank you </u></div><div class=""><u class="">Y.SH</u></div></div></div><div class="gmail_extra"><br class=""><div class="gmail_quote">On Sat, Jan 31, 2015 at 2:03 AM, Martin Sluka <span dir="ltr" class=""><<a href="mailto:martinsluka@mac.com" target="_blank" class="">martinsluka@mac.com</a>></span> wrote:<br class=""><blockquote class="gmail_quote" style="margin:0 0 0 .8ex;border-left:1px #ccc solid;padding-left:1ex"><div style="word-wrap:break-word" class=""><div class="">It is on my computer (OSX 10.8.5):</div><div class=""><br class=""></div><div class=""><div class="">as written in wiki:</div></div><div class=""><br class=""></div><div class=""><div class="">brew tap homebrew/science</div><div class="">brew install <a href="https://raw.githubusercontent.com/ladislavb/homebrew-science/master/therion.rb" target="_blank" class="">https://raw.githubusercontent.com/ladislavb/homebrew-science/master/therion.rb</a> </div></div><div class=""><br class=""></div><div class=""><div class=""><br class=""></div></div><div class="">m.s.</div><div class=""><br class=""></div><div class=""><br class=""></div><div class=""><div class="">30. 1. 2015 v 22:23, Yones Shariatmadari <<a href="mailto:yonessh2@gmail.com" target="_blank" class="">yonessh2@gmail.com</a>>:</div><div class=""><div class="h5"><br class=""><blockquote type="cite" class=""><div dir="ltr" class=""><div style="margin:0px" class=""><b class=""><font face="trebuchet ms, sans-serif" class="">Hi</font></b></div><div style="margin:0px" class=""><b class=""><font face="trebuchet ms, sans-serif" class=""><br class=""></font></b></div><div style="margin:0px" class=""><b class=""><font face="trebuchet ms, sans-serif" class="">i use homebrew , it is very good for checking but that error is in terminal !!!</font></b></div><div style="margin:0px" class=""><b class=""><font face="trebuchet ms, sans-serif" class="">problem not solve.</font></b></div><div style="margin:0px" class=""><b class=""><font face="trebuchet ms, sans-serif" class=""><br class=""></font></b></div><div style="margin:0px" class=""><b class=""><font face="trebuchet ms, sans-serif" class="">please check this:</font></b></div><div style="margin:0px;font-size:11px;font-family:Menlo" class=""><br class=""></div><div style="margin:0px;font-size:11px;font-family:Menlo" class="">Macs-MacBook-Pro:therion yonesshariatmadari$ brew install therion</div><div style="margin:0px;font-size:11px;font-family:Menlo" class=""><span style="text-decoration:underline;color:rgb(195,55,32)" class="">Error</span>: No available formula for therion </div><div style="margin:0px;font-size:11px;font-family:Menlo" class="">Searching formulae...</div><div style="margin:0px;font-size:11px;font-family:Menlo" class="">Searching taps...</div><div style="margin:0px;font-size:11px;font-family:Menlo" class=""><br class=""></div></div><div class="gmail_extra"><br class=""><div class="gmail_quote">On Fri, Jan 30, 2015 at 3:37 PM, Martin Sluka <span dir="ltr" class=""><<a href="mailto:martinsluka@mac.com" target="_blank" class="">martinsluka@mac.com</a>></span> wrote:<br class=""><blockquote class="gmail_quote" style="margin:0 0 0 .8ex;border-left:1px #ccc solid;padding-left:1ex"><div style="word-wrap:break-word" class=""><br class=""><div class=""><div class="">30. 1. 2015 v 12:05, Yones Shariatmadari <<a href="mailto:yonessh2@gmail.com" target="_blank" class="">yonessh2@gmail.com</a>>:</div><span class=""><br class=""><blockquote type="cite" class=""><div style="font-family: Helvetica; font-size: inherit; font-style: normal; font-variant: normal; font-weight: normal; letter-spacing: normal; line-height: normal; text-align: -webkit-auto; text-indent: 0px; text-transform: none; white-space: normal; word-spacing: 0px;" class=""><font face="arial black, sans-serif" class="">what should i do?</font></div><div style="font-family: Helvetica; font-size: inherit; font-style: normal; font-variant: normal; font-weight: normal; letter-spacing: normal; line-height: normal; text-align: -webkit-auto; text-indent: 0px; text-transform: none; white-space: normal; word-spacing: 0px;" class=""><font face="arial black, sans-serif" class="">please help me</font></div><br class=""></blockquote></span></div><br class=""><div class="">Hi,</div><div class=""><br class=""></div><div class="">try to use HomeBrew instalation:</div><div class=""><br class=""></div><div class="">- download and install HomeBrew - <a href="http://brew.sh/" target="_blank" class="">http://brew.sh</a></div><div class=""><br class=""></div><div class="">- in terminal: brew install therion</div><span class=""><font color="#888888" class=""><div class=""><br class=""></div><div class="">m. </div></font></span></div><br class="">_______________________________________________<br class="">
Therion mailing list<br class="">
<a href="mailto:Therion@speleo.sk" target="_blank" class="">Therion@speleo.sk</a><br class="">
<a href="http://mailman.speleo.sk/mailman/listinfo/therion" target="_blank" class="">http://mailman.speleo.sk/mailman/listinfo/therion</a><br class="">
<br class=""></blockquote></div><br class=""><br clear="all" class=""><div class=""><br class=""></div>-- <br class=""><div class=""><div dir="ltr" class=""><div dir="ltr" style="font-family:arial;font-size:small" class="">Yones Shariatmadari </div><div dir="ltr" style="font-family:arial;font-size:small" class="">Master Student , Department of BioStatistics </div><div dir="ltr" style="font-family:arial;font-size:small" class="">School of Paramedical Science <a href="http://pms.sbmu.ac.ir/" target="_blank" class="">(PMS)</a></div><div dir="ltr" style="font-family:arial;font-size:small" class="">Shahid Beheshti University of Medical Sciences <a href="http://www.sbmu.ac.ir/" style="color:rgb(17,85,204)" target="_blank" class="">(S.B.M.U)</a><br class=""><div class="">Tehran, Iran</div></div></div></div>
</div>
_______________________________________________<br class="">Therion mailing list<br class=""><a href="mailto:Therion@speleo.sk" target="_blank" class="">Therion@speleo.sk</a><br class=""><a href="http://mailman.speleo.sk/mailman/listinfo/therion" target="_blank" class="">http://mailman.speleo.sk/mailman/listinfo/therion</a><br class=""></blockquote></div></div></div><br class=""></div><br class="">_______________________________________________<br class="">
Therion mailing list<br class="">
<a href="mailto:Therion@speleo.sk" class="">Therion@speleo.sk</a><br class="">
<a href="http://mailman.speleo.sk/mailman/listinfo/therion" target="_blank" class="">http://mailman.speleo.sk/mailman/listinfo/therion</a><br class="">
<br class=""></blockquote></div><br class=""><br clear="all" class=""><div class=""><br class=""></div>-- <br class=""><div class="gmail_signature"><div dir="ltr" class=""><div dir="ltr" style="font-family:arial;font-size:small" class="">Yones Shariatmadari </div><div dir="ltr" style="font-family:arial;font-size:small" class="">Master Student , Department of BioStatistics </div><div dir="ltr" style="font-family:arial;font-size:small" class="">School of Paramedical Science <a href="http://pms.sbmu.ac.ir/" target="_blank" class="">(PMS)</a></div><div dir="ltr" style="font-family:arial;font-size:small" class="">Shahid Beheshti University of Medical Sciences <a href="http://www.sbmu.ac.ir/" style="color:rgb(17,85,204)" target="_blank" class="">(S.B.M.U)</a><br class=""><div class="">Tehran, Iran</div></div></div></div>
</div>
_______________________________________________<br class="">Therion mailing list<br class=""><a href="mailto:Therion@speleo.sk" class="">Therion@speleo.sk</a><br class="">http://mailman.speleo.sk/mailman/listinfo/therion<br class=""></div></blockquote></div><br class=""></div></body></html>