[Therion] The results of your email commands

Ladislav Blažek ladislav at lblazek.cz
Sun Feb 1 13:40:20 CET 2015


Official version (5.3.15) is broken - you need additional patches for Yosemite and VTK6 to be bale to compile Loch. Actually I sent you mail when I adapted Olly’s patch and included it in my formula fork. L.

> 1. 2. 2015 v 13:35, Christian Sandrini <christian.sandrini at me.com>:
> 
> No worries but I think in the wiki they should rather use the official one from the homebrew repository.
> 
> brew update
> brew install homebrew/science/therion
> 
> But currently homebrew/science/therion has only version 5.3.15 until the pull request has been accepted.
> 
> best
> Chris
> 
> 
>> On 01 Feb 2015, at 13:32, Ladislav Blažek <ladislav at lblazek.cz <mailto:ladislav at lblazek.cz>> wrote:
>> 
>> Hi Chris,
>> wiki page updated with link to your repository. I used my version for 5.3.15 where additional VTK6 patch was needed for OS X Yosemite. I am not programmer and it was for first time I used git/github <smile.png>
>> 
>> L.
>> 
>>> 1. 2. 2015 v 13:19, Christian Sandrini <christian.sandrini at me.com <mailto:christian.sandrini at me.com>>:
>>> 
>>> Hi Ladislav
>>> 
>>> Please use prober git merging. It is outdated.
>>> I have already done a pull request for the 5.3.16 version
>>> 
>>> You can happily contribute to my repository
>>> 
>>> https://github.com/un1x86/homebrew-science/blob/therion/therion.rb <https://github.com/un1x86/homebrew-science/blob/therion/therion.rb>
>>> 
>>> Best
>>> Chris
>>> 
>>> 
>>>> On 01 Feb 2015, at 13:12, Ladislav Blažek <ladislav at lblazek.cz <mailto:ladislav at lblazek.cz>> wrote:
>>>> 
>>>> Hi,
>>>> if you need urgently install therion 5.3.16 you can use updated formulae from my github repository- just follow my tutorial on wiki pages http://therion.speleo.sk/wiki/doku.php/os-tips:osx <http://therion.speleo.sk/wiki/doku.php/os-tips:osx>
>>>> 
>>>> I will try to send pull request but need to check guidelines.
>>>> 
>>>> L.
>>>> 
>>>>> 1. 2. 2015 v 12:55, Martin Sluka <martinsluka at mac.com <mailto:martinsluka at mac.com>>:
>>>>> 
>>>>> if you run from Terminal command “xtherion” what’s happen?
>>>>> 
>>>>> I have problem to open thconfig file. But if I rename thconfig to a.thconfig then it is possible to open.
>>>>> 
>>>>> m.s.
>>>>> 
>>>>> 
>>>>> 
>>>>> 
>>>>>> 1. 2. 2015 v 9:25, Yones Shariatmadari <yonessh2 at gmail.com <mailto:yonessh2 at gmail.com>>:
>>>>>> 
>>>>>> restore mac os 10.10.1 and try to install therion again.
>>>>>> 
>>>>>> all of program install and work good but therion doesn't run!!!
>>>>>> also loch work very well.
>>>>>> 
>>>>>> 
>>>>>> ==> Patching
>>>>>> patching file loch/lxData.cxx
>>>>>> Hunk #1 succeeded at 540 (offset 5 lines).
>>>>>> Hunk #2 succeeded at 582 (offset 5 lines).
>>>>>> patching file loch/Makefile
>>>>>> ==> make config-macosx
>>>>>> ==> make
>>>>>> ==> make install
>>>>>> 🍺  /usr/local/Cellar/therion/5.3.15: 6 files, 4.4M, built in 2.1 minutes
>>>>>> Macs-MacBook-Pro:/ yonesshariatmadari$ xtherion
>>>>>> /usr/local/bin/xtherion: line 3: exec: wish: not foundw
>>>>>> 
>>>>>> On Sun, Feb 1, 2015 at 11:42 AM, Martin Sluka <martinsluka at mac.com <mailto:martinsluka at mac.com>> wrote:
>>>>>> Instalation on Yosemite:
>>>>>> 
>>>>>> - installed MacTex
>>>>>> - installed (but still version 5.3.15 only!) Therion according recipe on wiki from Láďa Blažek successfully :
>>>>>> 
>>>>>> Martin-iMac:~ martinsluka1$ brew install https://raw.githubusercontent.com/ladislavb/homebrew-science/master/therion.rb <https://raw.githubusercontent.com/ladislavb/homebrew-science/master/therion.rb>
>>>>>> ######################################################################## 100,0%
>>>>>> ==> Installing dependencies for therion: fontconfig, vtk
>>>>>> ==> Installing therion dependency: fontconfig
>>>>>> ==> Downloading https://downloads.sf.net/project/machomebrew/Bottles/fontconfig-2.11.1.yosemite.bottle.3.tar.gz <https://downloads.sf.net/project/machomebrew/Bottles/fontconfig-2.11.1.yosemite.bottle.3.tar.gz>
>>>>>> ######################################################################## 100,0%
>>>>>> ==> Pouring fontconfig-2.11.1.yosemite.bottle.3.tar.gz
>>>>>> ==> /usr/local/Cellar/fontconfig/2.11.1/bin/fc-cache -frv
>>>>>>   /usr/local/Cellar/fontconfig/2.11.1: 448 files, 3,6M
>>>>>> ==> Installing therion dependency: vtk
>>>>>> ==> Downloading https://downloads.sf.net/project/machomebrew/Bottles/science/vtk-6.1.0_1.yosemite.bottle.tar.gz <https://downloads.sf.net/project/machomebrew/Bottles/science/vtk-6.1.0_1.yosemite.bottle.tar.gz>
>>>>>> ######################################################################## 100,0%
>>>>>> ==> Pouring vtk-6.1.0_1.yosemite.bottle.tar.gz
>>>>>> ==> Caveats
>>>>>> Even without the --with-qt option, you can display native VTK render windows
>>>>>> from python. Alternatively, you can integrate the RenderWindowInteractor
>>>>>> in PyQt, PySide, Tk or Wx at runtime. Read more:
>>>>>>     import vtk.qt4; help(vtk.qt4) or import vtk.wx; help(vtk.wx)
>>>>>> ==> Summary
>>>>>>   /usr/local/Cellar/vtk/6.1.0_1: 3005 files, 123M
>>>>>> ==> Installing therion
>>>>>> ==> Downloading http://therion.speleo.sk/downloads/therion-5.3.15.tar.gz <http://therion.speleo.sk/downloads/therion-5.3.15.tar.gz>
>>>>>> Already downloaded: /Library/Caches/Homebrew/therion-5.3.15.tar.gz
>>>>>> ==> Downloading http://www.lblazek.cz/osx_vtk6.patch <http://www.lblazek.cz/osx_vtk6.patch>
>>>>>> ######################################################################## 100,0%
>>>>>> ==> Patching
>>>>>> patching file loch/lxData.cxx
>>>>>> Hunk #1 succeeded at 540 (offset 5 lines).
>>>>>> Hunk #2 succeeded at 582 (offset 5 lines).
>>>>>> patching file loch/Makefile
>>>>>> ==> make config-macosx
>>>>>> ==> make
>>>>>> ==> make install
>>>>>>   /usr/local/Cellar/therion/5.3.15: 6 files, 4,4M, built in 2.5 minutes
>>>>>> Martin-iMac:~ martinsluka1$ xtherion
>>>>>> 
>>>>>> 
>>>>>> 
>>>>>>> 1. 2. 2015 v 0:22, Martin Sluka <martinsluka at mac.com <mailto:martinsluka at mac.com>>:
>>>>>>> 
>>>>>>> Something wrong is there:
>>>>>>> 
>>>>>>>> 31. 1. 2015 v 20:43, Christian Sandrini <christian.sandrini at me.com <mailto:christian.sandrini at me.com>>:
>>>>>>>> 
>>>>>>>> For now therion still needs VTK5. While by default it tries to install VTK6.
>>>>>>> 
>>>>>>> ==> Installing therion
>>>>>>> ==> Downloading http://therion.speleo.sk/downloads/therion-5.3.15.tar.gz <http://therion.speleo.sk/downloads/therion-5.3.15.tar.gz>
>>>>>>> ######################################################################## 100,0%
>>>>>>> ==> make config-macosx
>>>>>>> ==> make
>>>>>>>          ^
>>>>>>> 1 error generated.
>>>>>>> make[1]: *** [.././loch/lxSetup.o] Error 1
>>>>>>> make[1]: *** Waiting for unfinished jobs....
>>>>>>> make: *** [loch/loch] Error 2
>>>>>>> 
>>>>>>> READ THIS: http://git.io/brew-troubleshooting <http://git.io/brew-troubleshooting>
>>>>>>> If reporting this issue please do so at (not Homebrew/homebrew):
>>>>>>>   https://github.com/homebrew/homebrew-science/issues <https://github.com/homebrew/homebrew-science/issues>
>>>>>>> 
>>>>>>> M.S.
>>>>>>> _______________________________________________
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>>>>>>> http://mailman.speleo.sk/mailman/listinfo/therion <http://mailman.speleo.sk/mailman/listinfo/therion>
>>>>>> 
>>>>>> 
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>>>>>> 
>>>>>> 
>>>>>> 
>>>>>> 
>>>>>> -- 
>>>>>> Yones Shariatmadari 
>>>>>> Master Student , Department of BioStatistics 
>>>>>> School of Paramedical Science (PMS) <http://pms.sbmu.ac.ir/>
>>>>>> Shahid Beheshti University of Medical Sciences (S.B.M.U) <http://www.sbmu.ac.ir/>
>>>>>> Tehran, Iran
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