Macs-MacBook-Pro:~ yonesshariatmadari$ brew install https://raw.githubusercontent.com/ladislavb/homebrew-science/master/therion.rb
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Warning: You have an outdated version of /usr/bin/install_name_tool installed.
This will cause binary package installations to fail.
This can happen if you install osx-gcc-installer or RailsInstaller.
To restore it, you must reinstall OS X or restore the binary from
the OS packages.
==> Installing dependencies for therion: libpng, freetype, libtool, jpeg, xz, imagemagick, lcdf-typetools, boost, fontconfig, szip, hdf5, libtiff, vtk, wxmac
==> Installing therion dependency: libpng
==> Downloading https://downloads.sf.net/project/machomebrew/Bottles/libpng-1.6.16.yosemite.bottle.tar.gz
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==> Pouring libpng-1.6.16.yosemite.bottle.tar.gz
/usr/bin/install_name_tool: object: /usr/local/Cellar/libpng/1.6.16/bin/pngfix malformed object (unknown load command 9)
Error: Failed to fix install names
The formula built, but you may encounter issues using it or linking other
formula against it.
==> Summary
🍺 /usr/local/Cellar/libpng/1.6.16: 17 files, 1.3M
==> Installing therion dependency: freetype
==> Downloading https://downloads.sf.net/project/machomebrew/Bottles/freetype-2.5.5.yosemite.bottle.tar.gz
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==> Pouring freetype-2.5.5.yosemite.bottle.tar.gz
/usr/bin/install_name_tool: object: /usr/local/Cellar/freetype/2.5.5/lib/libfreetype.6.dylib malformed object (unknown load command 8)
Error: Failed to fix install names
The formula built, but you may encounter issues using it or linking other
formula against it.
==> Summary
🍺 /usr/local/Cellar/freetype/2.5.5: 60 files, 2.6M
==> Installing therion dependency: libtool
==> Downloading https://downloads.sf.net/project/machomebrew/Bottles/libtool-2.4.5.yosemite.bottle.tar.gz
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==> Pouring libtool-2.4.5.yosemite.bottle.tar.gz
==> Caveats
In order to prevent conflicts with Apple's own libtool we have prepended a "g"
so, you have instead: glibtool and glibtoolize.
/usr/bin/install_name_tool: object: /usr/local/Cellar/libtool/2.4.5/lib/libltdl.7.dylib malformed object (unknown load command 8)
Error: Failed to fix install names
The formula built, but you may encounter issues using it or linking other
formula against it.
==> Summary
🍺 /usr/local/Cellar/libtool/2.4.5: 69 files, 3.8M
==> Installing therion dependency: jpeg
==> Downloading https://downloads.sf.net/project/machomebrew/Bottles/jpeg-8d.yosemite.bottle.2.tar.gz
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==> Pouring jpeg-8d.yosemite.bottle.2.tar.gz
/usr/bin/install_name_tool: object: /usr/local/Cellar/jpeg/8d/bin/cjpeg malformed object (unknown load command 9)
Error: Failed to fix install names
The formula built, but you may encounter issues using it or linking other
formula against it.
==> Summary
🍺 /usr/local/Cellar/jpeg/8d: 18 files, 776K
==> Installing therion dependency: xz
==> Downloading https://downloads.sf.net/project/machomebrew/Bottles/xz-5.2.0.yosemite.bottle.tar.gz
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==> Pouring xz-5.2.0.yosemite.bottle.tar.gz
/usr/bin/install_name_tool: object: /usr/local/Cellar/xz/5.2.0/bin/lzmadec malformed object (unknown load command 9)
Error: Failed to fix install names
The formula built, but you may encounter issues using it or linking other
formula against it.
==> Summary
🍺 /usr/local/Cellar/xz/5.2.0: 59 files, 1.7M
==> Installing therion dependency: imagemagick
==> Downloading https://downloads.sf.net/project/machomebrew/Bottles/imagemagick-6.9.0-3.yosemite.bottle.tar.gz
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==> Pouring imagemagick-6.9.0-3.yosemite.bottle.tar.gz
/usr/bin/install_name_tool: object: /usr/local/Cellar/imagemagick/6.9.0-3/bin/animate malformed object (unknown load command 9)
Error: Failed to fix install names
The formula built, but you may encounter issues using it or linking other
formula against it.
==> Summary
🍺 /usr/local/Cellar/imagemagick/6.9.0-3: 1440 files, 22M
==> Installing therion dependency: lcdf-typetools
couldn't understand kern.osversion `14.0.0'
==> Downloading http://www.lcdf.org/type/lcdf-typetools-2.104.tar.gz
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==> ./configure --prefix=/usr/local/Cellar/lcdf-typetools/2.104 --without-kpathsea
==> make install
🍺 /usr/local/Cellar/lcdf-typetools/2.104: 29 files, 4.3M, built in 5.5 minutes
==> Installing therion dependency: boost
==> Downloading https://downloads.sf.net/project/machomebrew/Bottles/boost-1.57.0.yosemite.bottle.tar.gz
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==> Pouring boost-1.57.0.yosemite.bottle.tar.gz
/usr/bin/install_name_tool: object: /usr/local/Cellar/boost/1.57.0/lib/libboost_atomic-mt.dylib malformed object (unknown load command 8)
Error: Failed to fix install names
The formula built, but you may encounter issues using it or linking other
formula against it.
==> Summary
🍺 /usr/local/Cellar/boost/1.57.0: 10572 files, 439M
==> Installing therion dependency: fontconfig
==> Downloading https://downloads.sf.net/project/machomebrew/Bottles/fontconfig-2.11.1.yosemite.bottle.3.tar.gz
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==> Pouring fontconfig-2.11.1.yosemite.bottle.3.tar.gz
/usr/bin/install_name_tool: object: /usr/local/Cellar/fontconfig/2.11.1/bin/fc-cache malformed object (unknown load command 9)
Error: Failed to fix install names
The formula built, but you may encounter issues using it or linking other
formula against it.
==> /usr/local/Cellar/fontconfig/2.11.1/bin/fc-cache -frv
^\Warning: The post-install step did not complete successfully
You can try again using `brew postinstall fontconfig`
==> Summary
🍺 /usr/local/Cellar/fontconfig/2.11.1: 448 files, 3.6M
==> Installing therion dependency: szip
couldn't understand kern.osversion `14.0.0'
==> Downloading http://www.hdfgroup.org/ftp/lib-external/szip/2.1/src/szip-2.1.tar.gz
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==> ./configure --prefix=/usr/local/Cellar/szip/2.1
==> make install
🍺 /usr/local/Cellar/szip/2.1: 9 files, 132K, built in 28 seconds
==> Installing therion dependency: hdf5
==> Downloading https://downloads.sf.net/project/machomebrew/Bottles/science/hdf5-1.8.14.yosemite.bottle.tar.gz
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==> Pouring hdf5-1.8.14.yosemite.bottle.tar.gz
/usr/bin/install_name_tool: object: /usr/local/Cellar/hdf5/1.8.14/bin/gif2h5 malformed object (unknown load command 9)
Error: Failed to fix install names
The formula built, but you may encounter issues using it or linking other
formula against it.
==> Summary
🍺 /usr/local/Cellar/hdf5/1.8.14: 118 files, 9.9M
==> Installing therion dependency: libtiff
==> Downloading https://downloads.sf.net/project/machomebrew/Bottles/libtiff-4.0.3.yosemite.bottle.tar.gz
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==> Pouring libtiff-4.0.3.yosemite.bottle.tar.gz
/usr/bin/install_name_tool: object: /usr/local/Cellar/libtiff/4.0.3/bin/bmp2tiff malformed object (unknown load command 9)
Error: Failed to fix install names
The formula built, but you may encounter issues using it or linking other
formula against it.
==> Summary
🍺 /usr/local/Cellar/libtiff/4.0.3: 254 files, 3.8M
==> Installing therion dependency: vtk
==> Downloading https://downloads.sf.net/project/machomebrew/Bottles/science/vtk-6.1.0_1.yosemite.bottle.tar.gz
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==> Pouring vtk-6.1.0_1.yosemite.bottle.tar.gz
==> Caveats
Even without the --with-qt option, you can display native VTK render windows
from python. Alternatively, you can integrate the RenderWindowInteractor
in PyQt, PySide, Tk or Wx at runtime. Read more:
import vtk.qt4; help(vtk.qt4) or import vtk.wx; help(vtk.wx)
Python modules have been installed and Homebrew's site-packages is not
in your Python sys.path, so you will not be able to import the modules
this formula installed. If you plan to develop with these modules,
please run:
mkdir -p /Users/yonesshariatmadari/Library/Python/2.7/lib/python/site-packages
echo 'import site; site.addsitedir("/usr/local/lib/python2.7/site-packages")' >> /Users/yonesshariatmadari/Library/Python/2.7/lib/python/site-packages/homebrew.pth
/usr/bin/install_name_tool: object: /usr/local/Cellar/vtk/6.1.0_1/bin/vtkHashSource-6.1 malformed object (unknown load command 9)
Error: Failed to fix install names
The formula built, but you may encounter issues using it or linking other
formula against it.
==> Summary
🍺 /usr/local/Cellar/vtk/6.1.0_1: 3005 files, 123M
==> Installing therion dependency: wxmac
==> Downloading https://downloads.sf.net/project/machomebrew/Bottles/wxmac-3.0.2.yosemite.bottle.9.tar.gz
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==> Pouring wxmac-3.0.2.yosemite.bottle.9.tar.gz
/usr/bin/install_name_tool: for architecture i386 object: /usr/local/Cellar/wxmac/3.0.2/bin/wxrc-3.0 malformed object (unknown load command 9)
Error: Failed to fix install names
The formula built, but you may encounter issues using it or linking other
formula against it.
==> Summary
🍺 /usr/local/Cellar/wxmac/3.0.2: 777 files, 41M
==> Installing therion
couldn't understand kern.osversion `14.0.0'
==> Downloading http://therion.speleo.sk/downloads/therion-5.3.15.tar.gz
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==> Downloading http://www.lblazek.cz/osx_vtk6.patch
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==> Patching
patching file loch/lxData.cxx
Hunk #1 succeeded at 540 (offset 5 lines).
Hunk #2 succeeded at 582 (offset 5 lines).
patching file loch/Makefile
==> make config-macosx
==> make
couldn't understand kern.osversion `14.0.0'
loch/lxFile.cxx: In member function ‘void lxFile::ImportPLT(const char*)’:
loch/lxFile.cxx:755: error: ‘getline’ was not declared in this scope
make: *** [extern/lxFile.o] Error 1
make: *** Waiting for unfinished jobs....
couldn't understand kern.osversion `14.0.0'
READ THIS: http://git.io/brew-troubleshooting
It is on my computer (OSX 10.8.5):as written in wiki:brew tap homebrew/sciencem.s.30. 1. 2015 v 22:23, Yones Shariatmadari <yonessh2@gmail.com>:Hii use homebrew , it is very good for checking but that error is in terminal !!!problem not solve.please check this:Macs-MacBook-Pro:therion yonesshariatmadari$ brew install therionError: No available formula for therionSearching formulae...Searching taps..._______________________________________________On Fri, Jan 30, 2015 at 3:37 PM, Martin Sluka <martinsluka@mac.com> wrote:30. 1. 2015 v 12:05, Yones Shariatmadari <yonessh2@gmail.com>:what should i do?please help meHi,try to use HomeBrew instalation:- download and install HomeBrew - http://brew.sh- in terminal: brew install therionm.
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